Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx6-1Q99MA9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm14058-201ENSMUST00000116082 735 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm15515-201ENSMUST00000117827 822 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm14921-201ENSMUST00000118643 908 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Mir6958-201ENSMUST00000184207 73 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm9540-201ENSMUST00000188230 478 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm19931-201ENSMUST00000198920 368 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-1Q99MA9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm7600-201ENSMUST00000209657 785 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm2594-201ENSMUST00000214774 742 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm39404-201ENSMUST00000216350 313 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm10752-201ENSMUST00000218348 729 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-1Q99MA9 Acot6-202ENSMUST00000222921 3622 ntBASIC11.81□□□□□ -0.52
Nkx6-1Q99MA9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms