Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Gm27046-201ENSMUST00000182160 463 ntBASIC11.07□□□□□ -0.64
Scrt1Q99M85 Gm43378-201ENSMUST00000199336 582 ntBASIC11.07□□□□□ -0.64
Scrt1Q99M85 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.07□□□□□ -0.64
Scrt1Q99M85 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.07□□□□□ -0.64
Scrt1Q99M85 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.07□□□□□ -0.64
Scrt1Q99M85 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Scrt1Q99M85 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm11930-201ENSMUST00000117788 190 ntBASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm26361-201ENSMUST00000158868 186 ntBASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.06□□□□□ -0.64
Scrt1Q99M85 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.06□□□□□ -0.64
Scrt1Q99M85 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.06□□□□□ -0.64
Scrt1Q99M85 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scrt1Q99M85 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scrt1Q99M85 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms