Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd3Q99LE3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm15703-201ENSMUST00000120250 880 ntBASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm13315-201ENSMUST00000120376 991 ntBASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm38241-201ENSMUST00000192641 898 ntBASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lysmd3Q99LE3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 Gm11597-201ENSMUST00000121423 964 ntBASIC13.05□□□□□ -0.32
Lysmd3Q99LE3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms