Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Gm9022-201ENSMUST00000182482 992 ntBASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcd2Q99JR8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Matn2-206ENSMUST00000228570 2798 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm24934-201ENSMUST00000103764 111 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm37835-201ENSMUST00000193305 361 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm18038-201ENSMUST00000197900 485 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm44958-201ENSMUST00000203734 736 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Smarcd2Q99JR8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm22133-201ENSMUST00000102082 109 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm24231-201ENSMUST00000104315 133 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm13408-201ENSMUST00000119822 798 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm13935-201ENSMUST00000121859 798 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm7467-201ENSMUST00000185173 652 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm9555-201ENSMUST00000200908 583 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Smarcd2Q99JR8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms