Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.49□□□□□ -0.09
Rfc4Q99J62 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rfc4Q99J62 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc4Q99J62 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm15711-201ENSMUST00000118889 535 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm12380-201ENSMUST00000119012 544 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm13408-201ENSMUST00000119822 798 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm11597-201ENSMUST00000121423 964 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm13935-201ENSMUST00000121859 798 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm9230-201ENSMUST00000188228 532 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm28071-201ENSMUST00000190355 478 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Gm45770-201ENSMUST00000212105 616 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.48□□□□□ -0.09
Rfc4Q99J62 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc4Q99J62 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.47□□□□□ -0.09
Rfc4Q99J62 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.47□□□□□ -0.09
Rfc4Q99J62 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.47□□□□□ -0.09
Rfc4Q99J62 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc4Q99J62 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc4Q99J62 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms