Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm10012-201ENSMUST00000078252 192 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm5356-201ENSMUST00000093326 615 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb4Q91XZ6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm27892-201ENSMUST00000185017 106 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm17794-201ENSMUST00000220252 955 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb4Q91XZ6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb4Q91XZ6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms