Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm12314-201ENSMUST00000118104 538 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm13342-201ENSMUST00000121055 207 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm17420-201ENSMUST00000164753 153 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Mospd4-201ENSMUST00000180618 576 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm18304-201ENSMUST00000189162 546 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm24136-201ENSMUST00000083374 165 ntBASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gm13392-201ENSMUST00000117708 150 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gm27243-201ENSMUST00000183964 521 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gm43118-201ENSMUST00000199149 775 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpap2Q8VC34 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Gm11793-201ENSMUST00000120433 981 ntBASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpap2Q8VC34 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms