Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gm37935-201ENSMUST00000192012 982 ntBASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Gm28693-202ENSMUST00000190758 331 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Gm18307-201ENSMUST00000206864 949 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Gm19220-201ENSMUST00000222682 803 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Syt7-204ENSMUST00000223586 1344 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nudcd3Q8R1N4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nudcd3Q8R1N4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms