Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm29396-201ENSMUST00000185659 716 ntBASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm45925-201ENSMUST00000218882 744 ntBASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sf3a1Q8K4Z5 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Gm13736-201ENSMUST00000119272 253 ntBASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sf3a1Q8K4Z5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Gm10434-201ENSMUST00000101158 471 ntBASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Gm18935-201ENSMUST00000212692 664 ntBASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Gm10608-202ENSMUST00000213924 676 ntBASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Gm7046-201ENSMUST00000221351 977 ntBASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Sf3a1Q8K4Z5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sf3a1Q8K4Z5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms