Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col23a1Q8K4G2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ighv2-1-201ENSMUST00000170946 353 ntBASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Gm3318-201ENSMUST00000217604 1183 ntBASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ap3s1-202ENSMUST00000224622 978 ntBASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col23a1Q8K4G2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col23a1Q8K4G2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm14942-201ENSMUST00000119642 336 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm12164-201ENSMUST00000121695 551 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm8815-201ENSMUST00000173809 620 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm29499-201ENSMUST00000189151 486 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm28329-201ENSMUST00000191208 689 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm29171-201ENSMUST00000191397 486 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm8956-201ENSMUST00000203939 825 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 AC168279.1-201ENSMUST00000214611 382 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm4604-201ENSMUST00000025040 390 ntBASIC15.08■□□□□ 0
Col23a1Q8K4G2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms