Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm19163-201ENSMUST00000223313 780 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm11978-201ENSMUST00000122315 466 ntBASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm26185-201ENSMUST00000157692 266 ntBASIC12.87□□□□□ -0.35
CopaQ8CIE6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm38158-201ENSMUST00000194617 339 ntBASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.87□□□□□ -0.35
CopaQ8CIE6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.87□□□□□ -0.35
CopaQ8CIE6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CopaQ8CIE6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm13342-201ENSMUST00000121055 207 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm13786-201ENSMUST00000122371 333 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm7809-201ENSMUST00000153199 742 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm7584-201ENSMUST00000175829 940 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm29396-201ENSMUST00000185659 716 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm7783-201ENSMUST00000204795 781 ntBASIC12.86□□□□□ -0.35
CopaQ8CIE6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
CopaQ8CIE6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms