Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Gm37008-201ENSMUST00000195712 319 ntBASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim9Q8C7M3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim9Q8C7M3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm5187-201ENSMUST00000117317 991 ntBASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm13316-201ENSMUST00000140537 691 ntBASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.84□□□□□ -0.19
Trim9Q8C7M3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms