Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm43703-201ENSMUST00000200523 763 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm5161-201ENSMUST00000075243 853 ntBASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smco3Q8BQM7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm15693-201ENSMUST00000120470 637 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm27741-201ENSMUST00000185060 237 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smco3Q8BQM7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm14767-201ENSMUST00000121559 586 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm14822-201ENSMUST00000122247 291 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms