Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdhr3Q8BL00 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm10156-201ENSMUST00000122364 462 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm17208-201ENSMUST00000168388 535 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm27701-201ENSMUST00000184498 110 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm37042-201ENSMUST00000193816 581 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm37922-201ENSMUST00000195596 455 ntBASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdhr3Q8BL00 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Snord83b-201ENSMUST00000104546 94 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm8213-201ENSMUST00000118191 441 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm15703-201ENSMUST00000120250 880 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdhr3Q8BL00 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms