Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.9□□□□□ -0.35
Chmp2bQ8BJF9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp2bQ8BJF9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp2bQ8BJF9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Proscos-202ENSMUST00000178990 666 ntBASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp2bQ8BJF9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms