Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm38266-201ENSMUST00000194931 421 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm43133-201ENSMUST00000197472 463 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm3961-201ENSMUST00000204425 994 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm9257-201ENSMUST00000221254 232 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Depdc1bQ8BH88 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm14723-201ENSMUST00000118686 215 ntBASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm16379-201ENSMUST00000161469 348 ntBASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm17208-201ENSMUST00000168388 535 ntBASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm8762-201ENSMUST00000193486 339 ntBASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Depdc1bQ8BH88 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Gm14921-201ENSMUST00000118643 908 ntBASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Depdc1bQ8BH88 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms