Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup98Q6PFD9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm13611-201ENSMUST00000118269 318 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm24514-201ENSMUST00000174961 285 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm9630-201ENSMUST00000178304 885 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm5733-201ENSMUST00000190232 939 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm38151-201ENSMUST00000195085 289 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm2965-201ENSMUST00000198365 343 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm42997-202ENSMUST00000200321 985 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm43916-201ENSMUST00000205062 967 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm6905-201ENSMUST00000205729 511 ntBASIC14.57□□□□□ -0.08
Nup98Q6PFD9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup98Q6PFD9 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Gm8365-201ENSMUST00000197334 648 ntBASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup98Q6PFD9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup98Q6PFD9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup98Q6PFD9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup98Q6PFD9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Nup98Q6PFD9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup98Q6PFD9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup98Q6PFD9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms