Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Gm4768-201ENSMUST00000206199 686 ntBASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Mir339-201ENSMUST00000083659 96 ntBASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ParpbpQ6IRT3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm14660-201ENSMUST00000119809 575 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm12291-201ENSMUST00000121627 311 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm22121-201ENSMUST00000175148 54 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Mir7085-201ENSMUST00000184353 66 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ParpbpQ6IRT3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
ParpbpQ6IRT3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Gm12742-201ENSMUST00000117326 410 ntBASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Gm12384-201ENSMUST00000119228 919 ntBASIC11.83□□□□□ -0.52
ParpbpQ6IRT3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms