Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.49□□□□□ -0.57
VcanQ62059 Gm18304-201ENSMUST00000189162 546 ntBASIC11.49□□□□□ -0.57
VcanQ62059 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VcanQ62059 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.49□□□□□ -0.57
VcanQ62059 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VcanQ62059 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Gm24078-201ENSMUST00000158184 103 ntBASIC11.49□□□□□ -0.57
VcanQ62059 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
VcanQ62059 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.49□□□□□ -0.57
VcanQ62059 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.49□□□□□ -0.57
VcanQ62059 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.49□□□□□ -0.57
VcanQ62059 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.49□□□□□ -0.57
VcanQ62059 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.49□□□□□ -0.57
VcanQ62059 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.49□□□□□ -0.57
VcanQ62059 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
VcanQ62059 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VcanQ62059 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VcanQ62059 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
VcanQ62059 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
VcanQ62059 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.48□□□□□ -0.57
VcanQ62059 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.48□□□□□ -0.57
VcanQ62059 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Gm6564-201ENSMUST00000075377 619 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VcanQ62059 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Gm43506-201ENSMUST00000200675 753 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
VcanQ62059 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Gm12579-201ENSMUST00000118040 783 ntBASIC11.48□□□□□ -0.57
VcanQ62059 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.48□□□□□ -0.57
VcanQ62059 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.48□□□□□ -0.57
VcanQ62059 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VcanQ62059 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Gm13171-201ENSMUST00000117233 391 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm12337-201ENSMUST00000119634 400 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm13263-201ENSMUST00000121271 838 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VcanQ62059 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.47□□□□□ -0.57
VcanQ62059 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.47□□□□□ -0.57
VcanQ62059 Gm18552-201ENSMUST00000187425 538 ntBASIC11.47□□□□□ -0.57
VcanQ62059 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VcanQ62059 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
VcanQ62059 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VcanQ62059 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms