Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC9.52□□□□□ -0.89
Foxc1Q61572 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Foxc1Q61572 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.52□□□□□ -0.89
Foxc1Q61572 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.51□□□□□ -0.89
Foxc1Q61572 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm14791-201ENSMUST00000119061 1166 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm13612-201ENSMUST00000119276 390 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.51□□□□□ -0.89
Foxc1Q61572 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm22094-201ENSMUST00000158976 117 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm28011-201ENSMUST00000184097 175 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm37676-201ENSMUST00000195496 507 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC9.51□□□□□ -0.89
Foxc1Q61572 AC134439.1-201ENSMUST00000220923 600 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 AC122924.1-201ENSMUST00000222044 163 ntBASIC9.51□□□□□ -0.89
Foxc1Q61572 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Foxc1Q61572 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Foxc1Q61572 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.5□□□□□ -0.89
Foxc1Q61572 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.5□□□□□ -0.89
Foxc1Q61572 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Foxc1Q61572 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms