Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Gm44069-201ENSMUST00000204898 506 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sox17Q61473 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox17Q61473 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox17Q61473 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.79□□□□□ -0.52
Sox17Q61473 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox17Q61473 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox17Q61473 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 Gm12291-201ENSMUST00000121627 311 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox17Q61473 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Gm2213-201ENSMUST00000197485 688 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox17Q61473 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Mir339-201ENSMUST00000083659 96 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox17Q61473 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox17Q61473 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Sox17Q61473 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox17Q61473 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.78□□□□□ -0.52
Sox17Q61473 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.77□□□□□ -0.52
Sox17Q61473 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox17Q61473 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.77□□□□□ -0.53
Sox17Q61473 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox17Q61473 Gm27306-201ENSMUST00000183970 107 ntBASIC11.77□□□□□ -0.53
Sox17Q61473 Gm27989-201ENSMUST00000184721 107 ntBASIC11.77□□□□□ -0.53
Sox17Q61473 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.77□□□□□ -0.53
Sox17Q61473 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox17Q61473 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.77□□□□□ -0.53
Sox17Q61473 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox17Q61473 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox17Q61473 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Sox17Q61473 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox17Q61473 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox17Q61473 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms