Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mkrn3Q60764 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mkrn3Q60764 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mkrn3Q60764 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.44□□□□□ -0.1
Mkrn3Q60764 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mkrn3Q60764 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mkrn3Q60764 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm22730-201ENSMUST00000158085 171 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm17046-201ENSMUST00000168078 850 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm5370-201ENSMUST00000187187 574 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm29354-201ENSMUST00000187613 696 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 CT009711.2-202ENSMUST00000224538 973 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.43□□□□□ -0.1
Mkrn3Q60764 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mkrn3Q60764 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Mup-ps15-201ENSMUST00000121741 539 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm42693-201ENSMUST00000196779 631 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Gm37893-201ENSMUST00000192826 2437 ntBASIC14.42□□□□□ -0.1
Mkrn3Q60764 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mkrn3Q60764 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mkrn3Q60764 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms