Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm14921-201ENSMUST00000118643 908 ntBASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm10576-201ENSMUST00000191927 825 ntBASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm44069-201ENSMUST00000204898 506 ntBASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm20445-201ENSMUST00000061905 565 ntBASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms