Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Gm42816-201ENSMUST00000198433 325 ntBASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps13aQ5H8C4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm18801-201ENSMUST00000186616 536 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm11500-201ENSMUST00000118237 601 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Gm43969-201ENSMUST00000204833 535 ntBASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps13aQ5H8C4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gm37197-201ENSMUST00000195607 401 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps13aQ5H8C4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms