Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.3□□□□□ -0.12
Gm28047Q3US59 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.3□□□□□ -0.12
Gm28047Q3US59 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.3□□□□□ -0.12
Gm28047Q3US59 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm28047Q3US59 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm12390-201ENSMUST00000117897 397 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm24136-201ENSMUST00000083374 165 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.29□□□□□ -0.12
Gm28047Q3US59 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28047Q3US59 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Gm9022-201ENSMUST00000182482 992 ntBASIC14.28□□□□□ -0.12
Gm28047Q3US59 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.28□□□□□ -0.12
Gm28047Q3US59 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.28□□□□□ -0.12
Gm28047Q3US59 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28047Q3US59 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gm28047Q3US59 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms