Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Gm17794-201ENSMUST00000220252 955 ntBASIC13.35□□□□□ -0.27
Trim43aQ3TL54 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim43aQ3TL54 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gm6152-201ENSMUST00000151704 340 ntBASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.34□□□□□ -0.27
Trim43aQ3TL54 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gm35960-201ENSMUST00000202712 767 ntBASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43aQ3TL54 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trim43aQ3TL54 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43aQ3TL54 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43aQ3TL54 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim43aQ3TL54 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms