Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.31□□□□□ -0.76
Trim63Q38HM4 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gm29518-201ENSMUST00000190858 372 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gm6443-201ENSMUST00000203599 874 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.3□□□□□ -0.76
Trim63Q38HM4 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trim63Q38HM4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.29□□□□□ -0.76
Trim63Q38HM4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.29□□□□□ -0.76
Trim63Q38HM4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.29□□□□□ -0.76
Trim63Q38HM4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms