Protein–RNA interactions for Protein: Q04207

Rela, Transcription factor p65, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RelaQ04207 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.1□□□□□ -0.31
RelaQ04207 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RelaQ04207 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RelaQ04207 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.1□□□□□ -0.31
RelaQ04207 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RelaQ04207 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RelaQ04207 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Gm8213-201ENSMUST00000118191 441 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Gm10156-201ENSMUST00000122364 462 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.09□□□□□ -0.31
RelaQ04207 Gm29649-201ENSMUST00000185649 419 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.09□□□□□ -0.31
RelaQ04207 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.09□□□□□ -0.31
RelaQ04207 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Gm6091-201ENSMUST00000098307 165 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RelaQ04207 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RelaQ04207 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.09□□□□□ -0.31
RelaQ04207 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RelaQ04207 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RelaQ04207 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RelaQ04207 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RelaQ04207 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RelaQ04207 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.08□□□□□ -0.31
RelaQ04207 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.08□□□□□ -0.31
RelaQ04207 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.08□□□□□ -0.32
RelaQ04207 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RelaQ04207 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RelaQ04207 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RelaQ04207 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.08□□□□□ -0.32
RelaQ04207 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.08□□□□□ -0.32
RelaQ04207 Gm8598-201ENSMUST00000221184 836 ntBASIC13.08□□□□□ -0.32
RelaQ04207 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RelaQ04207 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RelaQ04207 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RelaQ04207 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms