Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Gm13996-201ENSMUST00000118456 430 ntBASIC10.89□□□□□ -0.67
Nkx3-1P97436 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.89□□□□□ -0.67
Nkx3-1P97436 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.89□□□□□ -0.67
Nkx3-1P97436 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.89□□□□□ -0.67
Nkx3-1P97436 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.89□□□□□ -0.67
Nkx3-1P97436 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-1P97436 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Grk6-205ENSMUST00000224653 2976 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm13296-201ENSMUST00000117854 997 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm12176-201ENSMUST00000121420 875 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm45224-201ENSMUST00000208203 414 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-1P97436 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.88□□□□□ -0.67
Nkx3-1P97436 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-1P97436 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms