Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nkx2-3P97334 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12616-201ENSMUST00000118594 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12624-201ENSMUST00000177615 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12621-201ENSMUST00000177760 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12615-201ENSMUST00000177970 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12622-201ENSMUST00000177975 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12627-201ENSMUST00000178412 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12625-201ENSMUST00000179122 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12614-201ENSMUST00000179586 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm12613-201ENSMUST00000180323 382 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm18038-201ENSMUST00000197900 485 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm21811-201ENSMUST00000096485 930 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.73■□□□□ 0.11
Nkx2-3P97334 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx2-3P97334 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.72■□□□□ 0.11
Nkx2-3P97334 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Gm3332-201ENSMUST00000189337 928 ntBASIC15.72■□□□□ 0.11
Nkx2-3P97334 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.72■□□□□ 0.11
Nkx2-3P97334 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.72■□□□□ 0.11
Nkx2-3P97334 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.72■□□□□ 0.11
Nkx2-3P97334 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-3P97334 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.71■□□□□ 0.11
Nkx2-3P97334 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Gm12196-201ENSMUST00000120954 262 ntBASIC15.71■□□□□ 0.11
Nkx2-3P97334 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.71■□□□□ 0.11
Nkx2-3P97334 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-3P97334 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms