Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm25562-201ENSMUST00000104608 133 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm12470-201ENSMUST00000117239 1049 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Gm15207-201ENSMUST00000119259 442 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Gm12337-201ENSMUST00000119634 400 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm18711-201ENSMUST00000199341 750 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
PrkdcP97313 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Il17rd-203ENSMUST00000225146 3366 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm13827-201ENSMUST00000148801 372 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm44216-201ENSMUST00000203942 157 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC8.28□□□□□ -1.08
PrkdcP97313 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
PrkdcP97313 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm15982-201ENSMUST00000121681 554 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 AA623943-201ENSMUST00000121794 354 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm3150-201ENSMUST00000166418 204 ntBASIC8.28□□□□□ -1.08
PrkdcP97313 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC8.28□□□□□ -1.08
PrkdcP97313 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
PrkdcP97313 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
PrkdcP97313 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PrkdcP97313 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC8.27□□□□□ -1.08
PrkdcP97313 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
PrkdcP97313 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PrkdcP97313 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
PrkdcP97313 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC8.27□□□□□ -1.08
PrkdcP97313 AC164099.1-201ENSMUST00000227780 333 ntBASIC8.27□□□□□ -1.08
PrkdcP97313 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC8.27□□□□□ -1.08
PrkdcP97313 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
PrkdcP97313 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PrkdcP97313 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
PrkdcP97313 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC8.27□□□□□ -1.09
PrkdcP97313 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Gm9034-201ENSMUST00000182071 1005 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Gm44315-201ENSMUST00000203041 219 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PrkdcP97313 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC8.27□□□□□ -1.09
PrkdcP97313 Gm12418-201ENSMUST00000118116 942 ntBASIC8.27□□□□□ -1.09
PrkdcP97313 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms