Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Six5P70178 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Six5P70178 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.79□□□□□ -0.52
Six5P70178 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.79□□□□□ -0.52
Six5P70178 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Six5P70178 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Six5P70178 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.79□□□□□ -0.52
Six5P70178 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Gm23931-201ENSMUST00000103842 109 ntBASIC11.79□□□□□ -0.52
Six5P70178 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.79□□□□□ -0.52
Six5P70178 Mir1247-201ENSMUST00000116706 82 ntBASIC11.79□□□□□ -0.52
Six5P70178 Gm12502-201ENSMUST00000120197 444 ntBASIC11.79□□□□□ -0.52
Six5P70178 Gm8738-201ENSMUST00000172606 329 ntBASIC11.79□□□□□ -0.52
Six5P70178 Gm9630-201ENSMUST00000178304 885 ntBASIC11.79□□□□□ -0.52
Six5P70178 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Gm37424-201ENSMUST00000191727 561 ntBASIC11.79□□□□□ -0.52
Six5P70178 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.79□□□□□ -0.52
Six5P70178 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.79□□□□□ -0.52
Six5P70178 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.79□□□□□ -0.52
Six5P70178 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.79□□□□□ -0.52
Six5P70178 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.79□□□□□ -0.52
Six5P70178 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.79□□□□□ -0.52
Six5P70178 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.79□□□□□ -0.52
Six5P70178 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Six5P70178 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Six5P70178 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Six5P70178 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Six5P70178 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.78□□□□□ -0.52
Six5P70178 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.78□□□□□ -0.52
Six5P70178 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.78□□□□□ -0.52
Six5P70178 Gm14760-201ENSMUST00000121831 999 ntBASIC11.78□□□□□ -0.52
Six5P70178 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.78□□□□□ -0.52
Six5P70178 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.78□□□□□ -0.52
Six5P70178 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.78□□□□□ -0.52
Six5P70178 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.78□□□□□ -0.52
Six5P70178 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.78□□□□□ -0.52
Six5P70178 Gm37008-201ENSMUST00000195712 319 ntBASIC11.78□□□□□ -0.52
Six5P70178 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.78□□□□□ -0.52
Six5P70178 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.78□□□□□ -0.52
Six5P70178 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Six5P70178 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.78□□□□□ -0.52
Six5P70178 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Daam2-202ENSMUST00000224595 1926 ntBASIC11.78□□□□□ -0.52
Six5P70178 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms