Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gm3096-201ENSMUST00000185770 364 ntBASIC13.6□□□□□ -0.23
PrkcbP68404 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.6□□□□□ -0.23
PrkcbP68404 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.6□□□□□ -0.23
PrkcbP68404 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.6□□□□□ -0.23
PrkcbP68404 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PrkcbP68404 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PrkcbP68404 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.6□□□□□ -0.23
PrkcbP68404 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.59□□□□□ -0.23
PrkcbP68404 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Mir877-201ENSMUST00000104738 85 ntBASIC13.59□□□□□ -0.23
PrkcbP68404 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.59□□□□□ -0.23
PrkcbP68404 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.59□□□□□ -0.23
PrkcbP68404 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Gm27046-201ENSMUST00000182160 463 ntBASIC13.59□□□□□ -0.23
PrkcbP68404 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.59□□□□□ -0.23
PrkcbP68404 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PrkcbP68404 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Gm26035-201ENSMUST00000083065 308 ntBASIC13.59□□□□□ -0.23
PrkcbP68404 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PrkcbP68404 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PrkcbP68404 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PrkcbP68404 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
PrkcbP68404 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PrkcbP68404 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PrkcbP68404 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PrkcbP68404 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
PrkcbP68404 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
PrkcbP68404 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PrkcbP68404 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PrkcbP68404 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PrkcbP68404 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PrkcbP68404 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.58□□□□□ -0.23
PrkcbP68404 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.58□□□□□ -0.23
PrkcbP68404 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PrkcbP68404 Gm14832-201ENSMUST00000121289 322 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.58□□□□□ -0.24
PrkcbP68404 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Gm28882-201ENSMUST00000185504 314 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.58□□□□□ -0.24
PrkcbP68404 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.58□□□□□ -0.24
PrkcbP68404 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PrkcbP68404 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.58□□□□□ -0.24
PrkcbP68404 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PrkcbP68404 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PrkcbP68404 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PrkcbP68404 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PrkcbP68404 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PrkcbP68404 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PrkcbP68404 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PrkcbP68404 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PrkcbP68404 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PrkcbP68404 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
PrkcbP68404 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
PrkcbP68404 Gm14109-201ENSMUST00000118814 309 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms