Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm28071-201ENSMUST00000190355 478 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm43378-201ENSMUST00000199336 582 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm9555-201ENSMUST00000200908 583 ntBASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.85□□□□□ -0.03
Rhbdl3P58873 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rhbdl3P58873 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm5369-201ENSMUST00000217499 588 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Gm5455-201ENSMUST00000058710 715 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.84□□□□□ -0.03
Rhbdl3P58873 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rhbdl3P58873 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rhbdl3P58873 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rhbdl3P58873 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rhbdl3P58873 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rhbdl3P58873 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rhbdl3P58873 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm11450-201ENSMUST00000121144 333 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm5523-201ENSMUST00000180415 997 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm8959-201ENSMUST00000213150 571 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.83□□□□□ -0.04
Rhbdl3P58873 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rhbdl3P58873 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms