Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.16□□□□□ -0.78
Sssca1P56873 Gm15429-201ENSMUST00000151268 798 ntBASIC10.16□□□□□ -0.78
Sssca1P56873 Gm6152-201ENSMUST00000151704 340 ntBASIC10.16□□□□□ -0.78
Sssca1P56873 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Sssca1P56873 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Gm44872-201ENSMUST00000207864 420 ntBASIC10.16□□□□□ -0.78
Sssca1P56873 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.16□□□□□ -0.78
Sssca1P56873 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.16□□□□□ -0.78
Sssca1P56873 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.16□□□□□ -0.78
Sssca1P56873 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.16□□□□□ -0.78
Sssca1P56873 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sssca1P56873 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.15□□□□□ -0.78
Sssca1P56873 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.15□□□□□ -0.78
Sssca1P56873 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.15□□□□□ -0.78
Sssca1P56873 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.15□□□□□ -0.78
Sssca1P56873 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Gm16215-201ENSMUST00000161990 637 ntBASIC10.15□□□□□ -0.78
Sssca1P56873 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Sssca1P56873 Gm28631-201ENSMUST00000190740 334 ntBASIC10.15□□□□□ -0.78
Sssca1P56873 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.15□□□□□ -0.78
Sssca1P56873 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sssca1P56873 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.15□□□□□ -0.78
Sssca1P56873 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Sssca1P56873 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sssca1P56873 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sssca1P56873 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sssca1P56873 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sssca1P56873 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Sssca1P56873 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Sssca1P56873 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Sssca1P56873 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.15□□□□□ -0.79
Sssca1P56873 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sssca1P56873 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.14□□□□□ -0.79
Sssca1P56873 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sssca1P56873 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.14□□□□□ -0.79
Sssca1P56873 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms