Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.27□□□□□ -0.61
Abcd3P55096 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Abcd3P55096 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.27□□□□□ -0.61
Abcd3P55096 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Abcd3P55096 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm11964-201ENSMUST00000120982 444 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.26□□□□□ -0.61
Abcd3P55096 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Rmrp-201ENSMUST00000157463 271 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.26□□□□□ -0.61
Abcd3P55096 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.26□□□□□ -0.61
Abcd3P55096 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm40466-201ENSMUST00000212174 422 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.26□□□□□ -0.61
Abcd3P55096 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.26□□□□□ -0.61
Abcd3P55096 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Abcd3P55096 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.26□□□□□ -0.61
Abcd3P55096 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abcd3P55096 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm24231-201ENSMUST00000104315 133 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Abcd3P55096 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms