Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.84□□□□□ -0.35
Sox1P53783 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Trav11n-201ENSMUST00000200113 343 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Gm18460-201ENSMUST00000208088 464 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Sox1P53783 Gm45594-201ENSMUST00000211717 241 ntBASIC12.84□□□□□ -0.35
Sox1P53783 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox1P53783 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.84□□□□□ -0.35
Sox1P53783 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.84□□□□□ -0.35
Sox1P53783 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox1P53783 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox1P53783 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox1P53783 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Sox1P53783 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Sox1P53783 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox1P53783 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox1P53783 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.83□□□□□ -0.35
Sox1P53783 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.83□□□□□ -0.35
Sox1P53783 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox1P53783 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.83□□□□□ -0.36
Sox1P53783 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox1P53783 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox1P53783 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Sox1P53783 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox1P53783 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.83□□□□□ -0.36
Sox1P53783 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.83□□□□□ -0.36
Sox1P53783 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Gm10288-201ENSMUST00000084614 537 ntBASIC12.83□□□□□ -0.36
Sox1P53783 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox1P53783 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox1P53783 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox1P53783 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox1P53783 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox1P53783 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Sox1P53783 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Gm11989-201ENSMUST00000117240 672 ntBASIC12.82□□□□□ -0.36
Sox1P53783 Gm11362-201ENSMUST00000118838 850 ntBASIC12.82□□□□□ -0.36
Sox1P53783 Gm15595-201ENSMUST00000120840 961 ntBASIC12.82□□□□□ -0.36
Sox1P53783 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.82□□□□□ -0.36
Sox1P53783 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sox1P53783 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox1P53783 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
Sox1P53783 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.82□□□□□ -0.36
Sox1P53783 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox1P53783 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox1P53783 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.82□□□□□ -0.36
Sox1P53783 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sox1P53783 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox1P53783 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Sox1P53783 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms