Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm11524-201ENSMUST00000119349 807 ntBASIC10.43□□□□□ -0.74
Nkx2-1P50220 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Gm29667-201ENSMUST00000190817 490 ntBASIC10.43□□□□□ -0.74
Nkx2-1P50220 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.43□□□□□ -0.74
Nkx2-1P50220 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.43□□□□□ -0.74
Nkx2-1P50220 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-1P50220 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm19078-201ENSMUST00000206311 727 ntBASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.42□□□□□ -0.74
Nkx2-1P50220 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm9797-201ENSMUST00000052902 613 ntBASIC10.42□□□□□ -0.74
Nkx2-1P50220 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.42□□□□□ -0.74
Nkx2-1P50220 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.42□□□□□ -0.74
Nkx2-1P50220 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.42□□□□□ -0.74
Nkx2-1P50220 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 Syt7-204ENSMUST00000223586 1344 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms