Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.06□□□□□ -0.64
GdnfP48540 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.06□□□□□ -0.64
GdnfP48540 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.06□□□□□ -0.64
GdnfP48540 Gm2594-201ENSMUST00000214774 742 ntBASIC11.06□□□□□ -0.64
GdnfP48540 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.06□□□□□ -0.64
GdnfP48540 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.06□□□□□ -0.64
GdnfP48540 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
GdnfP48540 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.06□□□□□ -0.64
GdnfP48540 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.06□□□□□ -0.64
GdnfP48540 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.06□□□□□ -0.64
GdnfP48540 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.06□□□□□ -0.64
GdnfP48540 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
GdnfP48540 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
GdnfP48540 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.05□□□□□ -0.64
GdnfP48540 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
GdnfP48540 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.05□□□□□ -0.64
GdnfP48540 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
GdnfP48540 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Gm28911-201ENSMUST00000188837 117 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.05□□□□□ -0.64
GdnfP48540 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
GdnfP48540 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.05□□□□□ -0.64
GdnfP48540 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
GdnfP48540 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.05□□□□□ -0.64
GdnfP48540 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
GdnfP48540 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
GdnfP48540 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.04□□□□□ -0.64
GdnfP48540 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.04□□□□□ -0.64
GdnfP48540 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
GdnfP48540 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
GdnfP48540 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms