Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Msh2P43247 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Msh2P43247 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.98□□□□□ -0.33
Msh2P43247 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Msh2P43247 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh2P43247 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.97□□□□□ -0.33
Msh2P43247 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Msh2P43247 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.97□□□□□ -0.33
Msh2P43247 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.97□□□□□ -0.33
Msh2P43247 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.97□□□□□ -0.33
Msh2P43247 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.97□□□□□ -0.33
Msh2P43247 Gm7561-201ENSMUST00000211203 886 ntBASIC12.97□□□□□ -0.33
Msh2P43247 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.97□□□□□ -0.33
Msh2P43247 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.97□□□□□ -0.33
Msh2P43247 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Gm6091-201ENSMUST00000098307 165 ntBASIC12.97□□□□□ -0.33
Msh2P43247 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.97□□□□□ -0.33
Msh2P43247 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.97□□□□□ -0.33
Msh2P43247 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msh2P43247 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh2P43247 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Map1b-203ENSMUST00000223725 2669 ntBASIC12.96□□□□□ -0.33
Msh2P43247 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.96□□□□□ -0.33
Msh2P43247 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh2P43247 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Gm11618-201ENSMUST00000117946 267 ntBASIC12.96□□□□□ -0.33
Msh2P43247 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh2P43247 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Msh2P43247 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.96□□□□□ -0.33
Msh2P43247 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.96□□□□□ -0.33
Msh2P43247 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh2P43247 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.96□□□□□ -0.33
Msh2P43247 Gm5186-201ENSMUST00000218781 920 ntBASIC12.96□□□□□ -0.33
Msh2P43247 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.96□□□□□ -0.33
Msh2P43247 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Msh2P43247 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Msh2P43247 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Msh2P43247 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msh2P43247 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh2P43247 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Msh2P43247 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh2P43247 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh2P43247 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Msh2P43247 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Msh2P43247 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Msh2P43247 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Msh2P43247 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Msh2P43247 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Msh2P43247 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms