Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh4P39038 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh4P39038 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.07□□□□□ -0.48
Cdh4P39038 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdh4P39038 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.07□□□□□ -0.48
Cdh4P39038 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdh4P39038 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdh4P39038 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdh4P39038 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh4P39038 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Gm10434-201ENSMUST00000101158 471 ntBASIC12.06□□□□□ -0.48
Cdh4P39038 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdh4P39038 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdh4P39038 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdh4P39038 Mospd4-201ENSMUST00000180618 576 ntBASIC12.06□□□□□ -0.48
Cdh4P39038 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Gm22058-201ENSMUST00000083393 310 ntBASIC12.06□□□□□ -0.48
Cdh4P39038 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdh4P39038 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdh4P39038 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cdh4P39038 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Daam2-202ENSMUST00000224595 1926 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cdh4P39038 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms