Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HmgclP38060 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.41□□□□□ -0.42
HmgclP38060 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.41□□□□□ -0.42
HmgclP38060 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HmgclP38060 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HmgclP38060 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.4□□□□□ -0.42
HmgclP38060 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HmgclP38060 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HmgclP38060 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.4□□□□□ -0.42
HmgclP38060 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Gm14127-201ENSMUST00000117906 678 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.4□□□□□ -0.42
HmgclP38060 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
HmgclP38060 Gm9022-201ENSMUST00000182482 992 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.4□□□□□ -0.42
HmgclP38060 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Gm38002-201ENSMUST00000193255 180 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Gm43133-201ENSMUST00000197472 463 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.4□□□□□ -0.42
HmgclP38060 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.4□□□□□ -0.42
HmgclP38060 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HmgclP38060 Gm24136-201ENSMUST00000083374 165 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HmgclP38060 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HmgclP38060 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.4□□□□□ -0.42
HmgclP38060 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
HmgclP38060 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HmgclP38060 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HmgclP38060 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HmgclP38060 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.4□□□□□ -0.43
HmgclP38060 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
HmgclP38060 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.4□□□□□ -0.43
HmgclP38060 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HmgclP38060 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Gm12957-201ENSMUST00000117835 377 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Gm12314-201ENSMUST00000118104 538 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Gm6023-201ENSMUST00000118217 606 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.39□□□□□ -0.43
HmgclP38060 Gm13316-201ENSMUST00000140537 691 ntBASIC12.39□□□□□ -0.43
HmgclP38060 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HmgclP38060 Gm27243-201ENSMUST00000183964 521 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HmgclP38060 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.39□□□□□ -0.43
HmgclP38060 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HmgclP38060 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.39□□□□□ -0.43
HmgclP38060 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HmgclP38060 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
HmgclP38060 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HmgclP38060 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.39□□□□□ -0.43
HmgclP38060 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HmgclP38060 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms