Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfc1P35601 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rfc1P35601 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rfc1P35601 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.28□□□□□ -0.28
Rfc1P35601 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.28□□□□□ -0.28
Rfc1P35601 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfc1P35601 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rfc1P35601 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rfc1P35601 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfc1P35601 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rfc1P35601 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rfc1P35601 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rfc1P35601 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rfc1P35601 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfc1P35601 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Gm24694-201ENSMUST00000180054 110 ntBASIC13.27□□□□□ -0.29
Rfc1P35601 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Gm27390-201ENSMUST00000184516 176 ntBASIC13.27□□□□□ -0.29
Rfc1P35601 Gm27663-201ENSMUST00000184839 110 ntBASIC13.27□□□□□ -0.29
Rfc1P35601 Gm35960-201ENSMUST00000202712 767 ntBASIC13.27□□□□□ -0.29
Rfc1P35601 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.27□□□□□ -0.29
Rfc1P35601 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.27□□□□□ -0.29
Rfc1P35601 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfc1P35601 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rfc1P35601 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Rfc1P35601 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.27□□□□□ -0.29
Rfc1P35601 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rfc1P35601 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.26□□□□□ -0.29
Rfc1P35601 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Rfc1P35601 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.26□□□□□ -0.29
Rfc1P35601 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.26□□□□□ -0.29
Rfc1P35601 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Rfc1P35601 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.26□□□□□ -0.29
Rfc1P35601 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.26□□□□□ -0.29
Rfc1P35601 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.26□□□□□ -0.29
Rfc1P35601 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Gm5161-201ENSMUST00000075243 853 ntBASIC13.26□□□□□ -0.29
Rfc1P35601 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rfc1P35601 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfc1P35601 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfc1P35601 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfc1P35601 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfc1P35601 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfc1P35601 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.25□□□□□ -0.29
Rfc1P35601 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.25□□□□□ -0.29
Rfc1P35601 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfc1P35601 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfc1P35601 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms