Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm43818-201ENSMUST00000200605 466 ntBASIC12.89□□□□□ -0.35
Mmp13P33435 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Mmp13P33435 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Gm26035-201ENSMUST00000083065 308 ntBASIC12.89□□□□□ -0.35
Mmp13P33435 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.89□□□□□ -0.35
Mmp13P33435 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Mmp13P33435 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.88□□□□□ -0.35
Mmp13P33435 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Mmp13P33435 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Mmp13P33435 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Mmp13P33435 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Mmp13P33435 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.88□□□□□ -0.35
Mmp13P33435 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Gm13226-201ENSMUST00000117838 404 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Gm13369-201ENSMUST00000119442 987 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp13P33435 Gm27331-201ENSMUST00000183705 60 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Gm27731-201ENSMUST00000185192 107 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Gm29127-201ENSMUST00000188304 517 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Gm45784-201ENSMUST00000188360 142 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.88□□□□□ -0.35
Mmp13P33435 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.88□□□□□ -0.35
Mmp13P33435 Gm37922-201ENSMUST00000195596 455 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp13P33435 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.88□□□□□ -0.35
Mmp13P33435 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Mmp13P33435 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp13P33435 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp13P33435 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp13P33435 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp13P33435 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp13P33435 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Mmp13P33435 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.87□□□□□ -0.35
Mmp13P33435 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.87□□□□□ -0.35
Mmp13P33435 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.87□□□□□ -0.35
Mmp13P33435 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Mmp13P33435 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp13P33435 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.87□□□□□ -0.35
Mmp13P33435 Mir7085-201ENSMUST00000184353 66 ntBASIC12.87□□□□□ -0.35
Mmp13P33435 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.87□□□□□ -0.35
Mmp13P33435 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.87□□□□□ -0.35
Mmp13P33435 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp13P33435 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Mmp13P33435 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp13P33435 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms