Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.46□□□□□ -0.58
Cbx3P23198 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.46□□□□□ -0.58
Cbx3P23198 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.46□□□□□ -0.58
Cbx3P23198 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cbx3P23198 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cbx3P23198 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cbx3P23198 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Cbx3P23198 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cbx3P23198 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.45□□□□□ -0.58
Cbx3P23198 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.45□□□□□ -0.58
Cbx3P23198 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cbx3P23198 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.45□□□□□ -0.58
Cbx3P23198 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.45□□□□□ -0.58
Cbx3P23198 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Cbx3P23198 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.45□□□□□ -0.58
Cbx3P23198 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.45□□□□□ -0.58
Cbx3P23198 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Mir125a-201ENSMUST00000083545 68 ntBASIC11.45□□□□□ -0.58
Cbx3P23198 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cbx3P23198 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cbx3P23198 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cbx3P23198 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Cbx3P23198 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.45□□□□□ -0.58
Cbx3P23198 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.45□□□□□ -0.58
Cbx3P23198 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cbx3P23198 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cbx3P23198 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cbx3P23198 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.44□□□□□ -0.58
Cbx3P23198 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.44□□□□□ -0.58
Cbx3P23198 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.44□□□□□ -0.58
Cbx3P23198 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.44□□□□□ -0.58
Cbx3P23198 Gm18027-201ENSMUST00000218947 619 ntBASIC11.44□□□□□ -0.58
Cbx3P23198 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.44□□□□□ -0.58
Cbx3P23198 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.44□□□□□ -0.58
Cbx3P23198 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.44□□□□□ -0.58
Cbx3P23198 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms