Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.21□□□□□ -0.77
Cdx1P18111 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx1P18111 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx1P18111 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.21□□□□□ -0.77
Cdx1P18111 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.21□□□□□ -0.78
Cdx1P18111 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.21□□□□□ -0.78
Cdx1P18111 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cdx1P18111 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cdx1P18111 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Cdx1P18111 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.21□□□□□ -0.78
Cdx1P18111 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx1P18111 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.2□□□□□ -0.78
Cdx1P18111 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm13829-201ENSMUST00000119600 138 ntBASIC10.2□□□□□ -0.78
Cdx1P18111 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Cdx1P18111 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Cdx1P18111 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Cdx1P18111 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm4804-201ENSMUST00000182234 999 ntBASIC10.2□□□□□ -0.78
Cdx1P18111 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Cdx1P18111 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.2□□□□□ -0.78
Cdx1P18111 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.2□□□□□ -0.78
Cdx1P18111 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.2□□□□□ -0.78
Cdx1P18111 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Cdx1P18111 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx1P18111 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cdx1P18111 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.2□□□□□ -0.78
Cdx1P18111 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cdx1P18111 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cdx1P18111 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cdx1P18111 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cdx1P18111 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.19□□□□□ -0.78
Cdx1P18111 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Cdx1P18111 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms