Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.1□□□□□ -0.47
Msx1P13297 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.1□□□□□ -0.47
Msx1P13297 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Gm11222-201ENSMUST00000119005 738 ntBASIC12.1□□□□□ -0.47
Msx1P13297 Gm11978-201ENSMUST00000122315 466 ntBASIC12.1□□□□□ -0.47
Msx1P13297 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.1□□□□□ -0.47
Msx1P13297 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Msx1P13297 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Msx1P13297 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.1□□□□□ -0.47
Msx1P13297 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.1□□□□□ -0.47
Msx1P13297 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC12.1□□□□□ -0.47
Msx1P13297 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.1□□□□□ -0.47
Msx1P13297 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msx1P13297 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx1P13297 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx1P13297 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msx1P13297 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.09□□□□□ -0.47
Msx1P13297 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Msx1P13297 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC12.09□□□□□ -0.47
Msx1P13297 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.09□□□□□ -0.47
Msx1P13297 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.09□□□□□ -0.47
Msx1P13297 Gm3890-201ENSMUST00000182416 207 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Gm28180-201ENSMUST00000189608 722 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.09□□□□□ -0.47
Msx1P13297 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Msx1P13297 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Msx1P13297 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Msx1P13297 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.09□□□□□ -0.47
Msx1P13297 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msx1P13297 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms