Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fv4P11370 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.16□□□□□ -0.46
Fv4P11370 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.15□□□□□ -0.46
Fv4P11370 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.15□□□□□ -0.46
Fv4P11370 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.15□□□□□ -0.46
Fv4P11370 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.15□□□□□ -0.46
Fv4P11370 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.15□□□□□ -0.46
Fv4P11370 Gm7561-201ENSMUST00000211203 886 ntBASIC12.15□□□□□ -0.46
Fv4P11370 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Fv4P11370 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Fv4P11370 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fv4P11370 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Fv4P11370 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fv4P11370 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fv4P11370 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.15□□□□□ -0.47
Fv4P11370 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Fv4P11370 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fv4P11370 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.14□□□□□ -0.47
Fv4P11370 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Gm12490-201ENSMUST00000120255 560 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.14□□□□□ -0.47
Fv4P11370 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Rmrp-201ENSMUST00000157463 271 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.14□□□□□ -0.47
Fv4P11370 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fv4P11370 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Gm26927-201ENSMUST00000182385 965 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Gm27839-201ENSMUST00000184242 106 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Gm7063-201ENSMUST00000186840 981 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.14□□□□□ -0.47
Fv4P11370 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.14□□□□□ -0.47
Fv4P11370 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.14□□□□□ -0.47
Fv4P11370 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fv4P11370 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fv4P11370 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.14□□□□□ -0.47
Fv4P11370 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms