Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc6P10629 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc6P10629 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc6P10629 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc6P10629 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc6P10629 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc6P10629 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc6P10629 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc6P10629 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc6P10629 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc6P10629 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Gm11628-201ENSMUST00000117568 171 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 Gm7851-201ENSMUST00000117574 323 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Hoxc6P10629 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hoxc6P10629 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Hoxc6P10629 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.92□□□□□ -0.18
Hoxc6P10629 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc6P10629 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc6P10629 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc6P10629 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.91□□□□□ -0.18
Hoxc6P10629 Gm4482-201ENSMUST00000200876 742 ntBASIC13.91□□□□□ -0.18
Hoxc6P10629 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Gm10752-201ENSMUST00000218348 729 ntBASIC13.91□□□□□ -0.18
Hoxc6P10629 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc6P10629 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.91□□□□□ -0.18
Hoxc6P10629 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc6P10629 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc6P10629 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc6P10629 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc6P10629 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxc6P10629 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc6P10629 Mir7677-201ENSMUST00000184226 67 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxc6P10629 Gm43916-201ENSMUST00000205062 967 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 Gm17827-201ENSMUST00000211825 742 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.9□□□□□ -0.18
Hoxc6P10629 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc6P10629 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms