Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.96□□□□□ -0.65
UbbP0CG49 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.96□□□□□ -0.65
UbbP0CG49 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
UbbP0CG49 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.96□□□□□ -0.65
UbbP0CG49 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.96□□□□□ -0.65
UbbP0CG49 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm12341-201ENSMUST00000119724 503 ntBASIC10.96□□□□□ -0.65
UbbP0CG49 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.96□□□□□ -0.65
UbbP0CG49 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
UbbP0CG49 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm18473-201ENSMUST00000220543 868 ntBASIC10.96□□□□□ -0.65
UbbP0CG49 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UbbP0CG49 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
UbbP0CG49 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.96□□□□□ -0.66
UbbP0CG49 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.96□□□□□ -0.66
UbbP0CG49 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.96□□□□□ -0.66
UbbP0CG49 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UbbP0CG49 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
UbbP0CG49 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm6152-201ENSMUST00000151704 340 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm28631-201ENSMUST00000190740 334 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Gm28693-202ENSMUST00000190758 331 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.95□□□□□ -0.66
UbbP0CG49 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.95□□□□□ -0.66
UbbP0CG49 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UbbP0CG49 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.95□□□□□ -0.66
UbbP0CG49 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.94□□□□□ -0.66
UbbP0CG49 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.94□□□□□ -0.66
UbbP0CG49 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.94□□□□□ -0.66
UbbP0CG49 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.94□□□□□ -0.66
UbbP0CG49 Gm15429-201ENSMUST00000151268 798 ntBASIC10.94□□□□□ -0.66
UbbP0CG49 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UbbP0CG49 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UbbP0CG49 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UbbP0CG49 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.94□□□□□ -0.66
UbbP0CG49 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms